A method for printing digital images on at least one input roll of media in order to form at least one output roll by means of a roll-to-roll printing system is disclosed. The roll-to-roll printing system includes a digital image queue including an entry for each digital image to be printed. The method includes registering in an entry of the digital image queue a first digital item identifying the digital image and digital items of print properties of the digital image, printing the digital image according to the order of the entry in the digital image queue, and registering in the entry a second digital item identifying an input roll on which the digital image is going to be printed and a third digital item identifying an output roll on which the printed digital image is going to be wound. A roll-to-roll printing system is configured to apply the method.