It presented a method, performed in a secure element, the secure element being arranged to enable user applications of the secure element to verify authenticity of incoming user application commands. The method comprises the steps of: receiving a command from a secure element reader for a user application on the secure element, the command comprising an application identifier of the user application; determining whether there is a matching user application in the secure element; invoking the matching user application; and establishing, when there is an absence of any matching user applications, a communication channel with a remote application manager server and sending an absent user application message to the application manager server indicating that the user application has been requested on the secure element. A corresponding secure element, method for an application manager server and application manager server are also presented.