An image acquisition system includes an image acquisition device and a commanding device configured as a separate member from the image acquisition device to transmit an image acquisition execution command to the image acquisition device and thereby to cause the image acquisition device to perform an image acquisition operation. The commanding device includes an authentication information transmission unit configured to transmit authentication information to the image acquisition device to cause the image acquisition device to authenticate the commanding device. The image acquisition device includes an authentication information receiving unit configured to receive the authentication information transmitted from the commanding device, an authentication information recognition unit configured to recognize the authentication information received by the authentication information receiving unit, and a function limiting unit configured to limit a predetermined function of the image acquisition device based on the authentication information recognized by the authentication information recognition unit.