A circuit for generating a tracking error signal is provided. The circuit includes a digitized circuit, a short signal removing circuit and phase comparator. The digitized circuit receives first and second pick-up signals outputted from a pick-up head, and respectively compares the first and the second pick-up signals with a reference signal to obtain a first digital signal and a second digital signal. The short signal removing circuit is used for removing pulses in the first and the second digital signals, wherein the pulse width of the removed pulses are shorter than a preset time, and the first and second digital without the removed pulses are respectively served as a first determining signal and a second determining signal. The phase comparator receives the first determining signal and the second determining signal for outputting the tracking error signal according to a phase difference between the first and the second determining signals.