A document processing system is disclosed that is capable of processing both fixed-format and unfixed-format hand written paper documents. The document processing system includes an encoding unit that encodes a sheet ID for identifying a hand written first document on a sheet to generate a coded sheet ID; a decoding unit that decodes the coded sheet ID; a document-sheet ID association unit that associates the sheet ID with a document ID assigned to a computerized second document; a printing unit that acquires the sheet ID and prints the coded sheet ID on the first document; a sheet ID management unit that manages the sheet ID; an information acquisition unit that acquires the sheet ID decoded by the decoding unit, and hand-written data from the first document on which the coded sheet ID is printed; and a process-sheet ID association unit that associates the sheet ID with a process ID of a process for processing the hand-written data acquired by the information acquisition unit.