A method and system for N-way synchronization of computer databases. Synchronization of computer databases is structured into three rounds, namely an agenda round, a query round and a report round. In the agenda round, a synchronization agent software module inquires of a common synchronization engine for updates to the agent's database and provides information as to the level of information in the agent's database. During a query round, a common synchronization engine may request information from databases with new information and distribute that database information to databases needing the new information during a report round. Multiple agents, each representing an associated database may participate a synchronization. In addition, various special purpose agents may also receive, provide and otherwise operate on synchronization information.