A phase detecting module includes a phase detecting unit, a comparator and a counter. The phase detecting unit is arranged to compare a first input signal and a second input signal to generate a phase detecting result. The comparator is arranged to compare the phase detecting result and a predetermined voltage to generate a comparing result. The counter is arranged to count one of the first input signal and the second input signal to generate a counting value. The phase detecting result and the counting value are reset if the counting value reaches a predetermined value, and the comparing result is outputted to a target device from the comparator if the counting value reaches a predetermined value.