The present application discloses a method for fabricating a semiconductor device with a self-aligned landing pad. The method includes: providing a substrate; forming a dielectric layer with a plug over the substrate; performing an etching process to remove a portion of the dielectric layer to expose a protruding portion of the plug; forming a liner layer covering the dielectric layer and the protruding portion; and performing a thermal process to form a landing pad over the dielectric layer. The landing pad comprises a protruding portion of the plug, a first silicide layer disposed over the protruding portion, and a second silicide layer disposed on a sidewall of the protruding portion.