A particulate material sensing and agitation control system of an agricultural system having a drive system configured to operate an agitating system, and a controller having a memory and a processor. The controller is configured to receive at least one sensor signal indicative of a profile of a particulate material within the agricultural system, and output a control signal to instruct the drive system to operate the agitating system in a selected operating mode of a plurality of operating modes based on the profile of the particulate material. The agitating system is configured to interact with the particulate material in each operating mode of the plurality of operating modes, and the plurality of operating modes includes an agitation mode and a leveling mode.