The present disclosure relates to a system, method, and computer program for predicting migraines using machine learning. More specifically, the system predicts the likelihood that a user will have a migraine within a certain period of time (e.g., a month) based on migraine causes/triggers X1 . . . n identified from a migraine pattern built using deep neural networks. The system collects data from the user with respect to his/her profile, his/her migraine incidents (having experienced a migraine or not) and his/her daily habits. Based on these data, it creates the user's migraine pattern and combines this pattern with the migraine patterns from similar users (when necessary). As a result, it is able to predict the probability of getting a migraine within a period of time.