According to an embodiment, a structure evaluation system includes a plurality of sensors, a position locator, a velocity calculator, and an evaluator. The sensors detect an elastic wave generated from a structure. The position locator derives a wave source distribution of the elastic waves generated from the structure, on the basis of the elastic waves. The velocity calculator derives a propagation velocity of the elastic wave generated from the structure, on the basis of the elastic waves. The evaluator evaluates the soundness of the structure on the basis of the wave source distribution and the propagation velocity of the elastic waves.