The present disclosure provides a scan compensation method and a scan compensation circuit of a gate driver. The scan compensation method comprises: when the gate driver switching from first scanning mode to second scanning mode or from second scanning mode to first scanning mode, performing a first operation to a clock signal and a first compensation signal of the gate driver, and performing a second operation to the obtained signals and a second compensation signal, wherein the first scanning mode is a sequential scan mode, the second scanning mode is non-sequential scan mode.